Thanks for developing the package! I'm trying to use the pretrained model to predict cell type from bulk ATACseq data. Unfortunately, it's having a hard time locating the file test_functions (error attached below). Could you help me solve this error? Thanks again!
(pytorch_env) ./deconvolution.sh --model_path cellformer/ -peak_matrix ./CTRL_CAUD_AD.peak_countMatrix.txt
Traceback (most recent call last):
File "/tools/Cellformer/src/2_deconvolution/inference.py", line 29, in <module>
from test_functions import *
ModuleNotFoundError: No module named 'test_functions'
Done!
Thanks for developing the package! I'm trying to use the pretrained model to predict cell type from bulk ATACseq data. Unfortunately, it's having a hard time locating the file test_functions (error attached below). Could you help me solve this error? Thanks again!