search

elsiklab / multivariantviewer

A JBrowse plugin with a custom variant track for multi-VCF files and optionally plotting LD scores
9 stars 0 forks source link

LDmatrix #23

Closed romens96 closed 5 years ago

romens96 commented 5 years ago

Hi @cmdcolin,

I am having an issue where the LDmatrix could not find the directory of the data even though the correct directory is provided. I have tried to remove and get the plugin again and re-setup browse but it still won't work. Below is my error when running LDtrack. Also I wonder if it could be the double slash problem so I edited the js file in the plugin but it still doesn't solve the problem

[E::hts_open_format] Failed to open file http://my server external ip/jbrowse/data//myfile.vcf.gz Could not read http://my server external ip/jbrowse/data//myfile.vcf.gz

romens96 commented 5 years ago

Problem solved. It was my server configuration problem.