Jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end reads with respect to an assembled reference.
I tried to launch the script jitterbug.py without arguments, just to see if the installation was ok.
But I have this two error :
Traceback (most recent call last):
File "./jitterbug.py", line 21, in
from Run_TE_ID_reseq import *
File "/home/lhelou/local/jitterbug/Run_TE_ID_reseq.py", line 6, in
import pysam
ImportError: No module named pysam
Hi,
I tried to launch the script jitterbug.py without arguments, just to see if the installation was ok. But I have this two error :
jitterbug needs to be launch with Python2 right?
Can you help me? Thank you!