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elzbth / jitterbug

Jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end reads with respect to an assembled reference.
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process_ND_TD.py error #15

Open kimsjune opened 6 years ago

kimsjune commented 6 years ago

Hello,

I am facing the following error:

Traceback (most recent call last): File "/home/skim823/projects/def-fdick/skim823/programs/jitterbug/tools/process_ND_TD.py", line 467, in main(sys.argv[1:]) File "/home/skim823/projects/def-fdick/skim823/programs/jitterbug/tools/process_ND_TD.py", line 85, in main for line in open(read_stats_file): TypeError: coercing to Unicode: need string or buffer, NoneType found

I am running python 2.7.14.. I'd appreciate if anyone could help! Thanks

niederhuth commented 5 years ago

Hi,

I am also having the same issue and it seems that a cfg file is required, but I have no idea what this is supposed to look like or how to create one.

Thanks!

Nisha-Hemandhar-Kumar commented 5 years ago

Hi, I am also having the same issue, however I don't understand what the cfg file is. Thanks!