tischi
commented
5 years ago Thanks for reporting! Did it happen again? I will try to see whether I can understand what could have happened....
Open davodogster opened 5 years ago
tischi
commented
5 years ago Thanks for reporting! Did it happen again? I will try to see whether I can understand what could have happened....
I noticed that all the ROIS disappeared for one class and were not in the ROI manager when reviewing and I received a random Error when reviewing the labels:
Exception in thread "Thread-2075" java.lang.NullPointerException at ij.plugin.frame.RoiManager.add(RoiManager.java:470) at de.embl.cba.cats.ui.Overlays.addRoiToRoiManager(Overlays.java:348) at de.embl.cba.cats.ui.Overlays.addRoisToRoiManager(Overlays.java:342) at de.embl.cba.cats.ui.Overlays.reviewLabelsInRoiManager(Overlays.java:329) at de.embl.cba.cats.ui.Overlays.reviewLabelsInRoiManagerUI(Overlays.java:295) at de.embl.cba.cats.ui.CATSCommand.lambda$executeAction$0(CATSCommand.java:241) at java.lang.Thread.run(Thread.java:748)
Training: [INFO] Computing features values for 6 label groups using 12 threads. [INFO] Label set 1/6: Computing features for 1 label(s)... [INFO] Label set 2/6: Computing features for 1 label(s)... [INFO] Label set 3/6: Computing features for 1 label(s)... [INFO] Label set 3/6: ...done [INFO] Label set 2/6: ...done [INFO] Label set 5/6: Computing features for 1 label(s)... [INFO] Label set 4/6: Computing features for 1 label(s)... [INFO] Label set 1/6: ...done [INFO] Label set 6/6: Computing features for 1 label(s)... [INFO] Label set 6/6: ...done [INFO] Label set 5/6: ...done [INFO] Label set 4/6: ...done [INFO] Computed feature values for 6 labels; total number of labels is 318 [INFO]
Instances information
[INFO] Number of instances: 4941 [INFO] Number of attributes: 613 Exception in thread "Thread-2088" java.lang.ArrayIndexOutOfBoundsException: 1 at de.embl.cba.cats.labels.LabelManager.getNumLabelsPerClass(LabelManager.java:113) at de.embl.cba.cats.ui.LabelButtonsPanel.setLabellingInformations(LabelButtonsPanel.java:77) at de.embl.cba.cats.ui.CATSCommand.updateLabelInstances(CATSCommand.java:434) at de.embl.cba.cats.ui.CATSCommand.lambda$updateLabelsAndTrainClassifier$2(CATSCommand.java:541) at java.lang.Thread.run(Thread.java:748)