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embl-cba / imagej-utils

BSD 2-Clause "Simplified" License
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Opening new sources/deleting existing ones #11

Closed martinschorb closed 4 years ago

martinschorb commented 4 years ago

Hi,

When I run SpimDataset > Open XML/HDF5 files it always add these to the existing sources list. This is a bit annoying if I want to look at two different experiments at the same time. I have to do a full Fiji restart to get rid of the previous sources. When I try to delete all of them to get an empty sources list I get the following crash:

java.lang.IllegalArgumentException: node does not have a parent.
    at javax.swing.tree.DefaultTreeModel.removeNodeFromParent(DefaultTreeModel.java:254)
    at sc.fiji.bdvpg.scijava.services.ui.BdvSourceServiceUI.lambda$updateSpimDataFilterNodes$10(BdvSourceServiceUI.java:329)
    at java.util.ArrayList.forEach(ArrayList.java:1257)
    at sc.fiji.bdvpg.scijava.services.ui.BdvSourceServiceUI.updateSpimDataFilterNodes(BdvSourceServiceUI.java:327)
    at sc.fiji.bdvpg.scijava.services.ui.BdvSourceServiceUI.remove(BdvSourceServiceUI.java:418)
    at sc.fiji.bdvpg.scijava.services.BdvSourceAndConverterService.remove(BdvSourceAndConverterService.java:162)
    at sc.fiji.bdvpg.scijava.command.source.SourcesRemoverCommand.run(SourcesRemoverCommand.java:23)
    at org.scijava.command.CommandModule.run(CommandModule.java:199)
    at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
    at org.scijava.thread.DefaultThreadService.lambda$wrap$2(DefaultThreadService.java:228)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)

killing the whole BDV and requiring a Fiji restart.

martinschorb commented 4 years ago

wrong repo