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emilydolson
/
phylotrackpy
Python phylogeny tracker for in silico evolution experiments
MIT License
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Add citing info to README.md
#96
mmore500
closed
3 weeks ago
0
Revise manuscript
#95
mmore500
opened
1 month ago
1
Fix number formatting
#94
mmore500
closed
1 month ago
1
Fix citations in manuscript
#93
mmore500
closed
1 month ago
0
Fix typo in README
#92
mmore500
closed
1 month ago
1
Mysterious interaction with Jupyter/IPython causes deserialization to hang
#91
mmore500
opened
2 months ago
2
Bump pillow from 10.2.0 to 10.3.0 in /profile
#90
dependabot[bot]
opened
2 months ago
0
Bump Empirical from `a0b6ecc` to `9e7165a`
#89
dependabot[bot]
closed
1 month ago
1
Add Zenodo badge
#88
mmore500
closed
3 months ago
1
`get_mean_pairwise_distance` hangs (>10 min) on deserialized tree
#87
mmore500
opened
3 months ago
5
Loading from bad path crashes Python interpreter
#86
mmore500
opened
3 months ago
0
Requested feature: `GetNumTips()`
#85
mmore500
opened
3 months ago
0
Docs improvements
#84
emilydolson
closed
3 months ago
1
`colless_like_index` crashes for empty tree
#83
mmore500
opened
3 months ago
0
Remove leftover debugging cruft
#82
mmore500
closed
3 months ago
0
Packaging: wheel not available, build from source fails
#81
mmore500
opened
3 months ago
2
Quickstart test
#80
Sanaz11-3
opened
3 months ago
1
Remove under construction warning from API docs
#79
mmore500
closed
3 months ago
1
Add example usage using nbshinx
#78
mmore500
closed
3 months ago
1
Rename `sys` variables to avoid shadowing `sys` module
#77
mmore500
closed
3 months ago
2
Remove taxon constructor
#76
emilydolson
closed
3 months ago
1
Bump checkout action
#75
emilydolson
closed
3 months ago
1
Bump wheels to latest versions
#74
emilydolson
closed
3 months ago
1
Fix no-longer in press citation
#73
emilydolson
closed
3 months ago
1
Final touchups on JOSS manuscript
#72
mmore500
closed
3 months ago
1
Bump pillow from 10.1.0 to 10.2.0 in /profile
#71
dependabot[bot]
closed
3 months ago
1
Bump version: 0.1.18 → 0.2.0
#70
mmore500
closed
4 months ago
0
Bump cibuildwheel pin
#69
mmore500
closed
4 months ago
0
Fix CI wheel build on windows
#68
mmore500
closed
4 months ago
0
Impl, test sum branch distance binding
#67
mmore500
closed
4 months ago
2
Write blurb for alife newsletter
#66
mmore500
opened
5 months ago
0
Crossref hstrat and phylotrackpy with each other
#65
mmore500
closed
5 months ago
1
Try adding test coverage
#64
emilydolson
closed
4 months ago
3
Update docs
#63
emilydolson
closed
6 months ago
1
Fix segfault in load
#62
emilydolson
closed
6 months ago
1
Clearer error on comparison between unsupported taxon_info types
#61
emilydolson
opened
6 months ago
0
Avoid storing __eq__ operator for every taxon_info object
#60
emilydolson
opened
6 months ago
0
Fix citation syntax
#59
mmore500
closed
6 months ago
0
Add get pairwise distance
#58
emilydolson
closed
7 months ago
1
Demonstrate and fix string bug
#57
emilydolson
closed
6 months ago
1
Bump Empirical from `ed27152` to `58c6d81`
#56
dependabot[bot]
closed
7 months ago
3
Fix windows build
#55
emilydolson
closed
7 months ago
6
Tests fail on wheels for windows
#54
mmore500
closed
6 months ago
1
Add instructions for github, local installs RE #32
#53
mmore500
closed
7 months ago
1
Fixup dev experience, RE #33
#52
mmore500
closed
7 months ago
1
Column key `"info"` defaulted in `load_from_file` isn't included by default when calling `snapshot`
#51
mmore500
opened
7 months ago
1
Fix broken docs links in README
#50
mmore500
closed
7 months ago
0
`load_from_file` segfaults if root is extant
#49
mmore500
closed
6 months ago
0
Creating a taxon manually can cause invalid snapshot files
#48
mmore500
closed
3 months ago
2
Implement, test py::object as taxon type
#47
mmore500
closed
6 months ago
16
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