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emilyncosta / UNIFESP_NTM_newspecies-nf

Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
https://doi.org/10.5281/zenodo.4660336
MIT License
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Fix the `combine_orthoani_results` module #2

Closed emilyncosta closed 3 years ago

emilyncosta commented 3 years ago

Hi @Mxrcon,

The following module is raising an error while running the pipeline at the moment for some reason, if possible could you please test this module in isolation using stubs?

https://github.com/bioinformatics-lab/camila_sao_paulo_nf/blob/main/modules/utils/combine_orthoani_results_tsv/combine_orthoani_results_tsv.nf

Mxrcon commented 3 years ago

@emilyncosta yes sure, I'll give test and return here