Hi Emmanuel,
I added some code to allow the image functions to use different color schemes. Both functions call now a function called image.worker. I also added several color schemes which might be useful and are used in tools like ggmsa, jalview, geneious or snapgene. I'm going use these color schemes in phangorn in the functions image.phyDat, which calls the ape functions, and for plotting ancestral states in plotAnc. You might want to try it in my repository.
Let me know what you think.
Regards,
Klaus
Hi Emmanuel, I added some code to allow the
image
functions to use different color schemes. Both functions call now a function calledimage.worker
. I also added several color schemes which might be useful and are used in tools likeggmsa
,jalview
,geneious
orsnapgene
. I'm going use these color schemes inphangorn
in the functionsimage.phyDat
, which calls the ape functions, and for plotting ancestral states inplotAnc
. You might want to try it in my repository.Let me know what you think.
Regards, Klaus