emo-bon / MetaGOflow

MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project
https://metagoflow.readthedocs.io
Apache License 2.0
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remove raw data from ro-crate in case ENA fetch tool is used #32

Closed hariszaf closed 1 year ago

hariszaf commented 1 year ago

When metaGOflow runs using ena fetch, then a raw_data folder is built under the output folder. However, we do not need these raw data in the rocrate. Thus, move the raw data folder out of the output folder or remove those in general before the rocrate