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emo-bon / MetaGOflow

MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project
https://metagoflow.readthedocs.io
Apache License 2.0
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eggNOG output is not returned #36

Closed hariszaf closed 1 year ago

hariszaf commented 1 year ago

The output of the eggNOG annotation is not returned.

It's not only about adding a file in the outputs, but you also need to parse the output file in order to build a summary like for kos, ips etc.

For example: 

"GO:0006355","regulation of transcription, DNA-templated","biological_process","36"
"GO:0055085","transmembrane transport","biological_process","33"
"GO:0006412","translation","biological_process","28"
hariszaf commented 1 year ago

Summary as a 3-column file is now part of the functional-annotation dir.