emvolz treedater issues

emvolz / treedater

Scalable relaxed clock phylogenetic dating

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issues

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Generate the tmrca of every node

#23 Dhihram opened 1 month ago
5
Error in if (cv > 1) { : missing value where TRUE/FALSE needed message

#22 Dhihram opened 1 month ago
4
fix checks for initial start conditions

#21 daileyco opened 5 months ago
1
Error when providing multiple initial values for mutation rate

#20 daileyco opened 5 months ago
0
outlierTips() always prints some output to console

#19 stitam opened 3 years ago
0
Error in double(nm * nm) : vector size cannot be NA

#18 brmagalis opened 3 years ago
2
Units for meanRateLimits

#17 ksw9 closed 4 years ago
2
adding .gitignore file for common R files

#16 stevenweaver closed 2 years ago
0
Error when automatically selecting initial mean rates

#15 emvolz opened 4 years ago
2
Missing dates

#14 slvrshot closed 4 years ago
7
How to add dates if they are not already on tip labels or can I import them from a csv file?

#13 slvrshot closed 4 years ago
1
Suggest harmonicmeanp version > 3

#12 emvolz opened 5 years ago
1
Raise informative error message when boot(.) tres argument does not match td argument

#11 emvolz closed 5 years ago
1
Provide informative warning & suggestions if bootstrap intervals do not cover pseudo-ml

#10 emvolz opened 5 years ago
0
*boot* does not show progress when quiet=FALSE

#9 emvolz closed 5 years ago
1
rootToTipRegressionPlot should have option to print tip labels

#8 emvolz closed 4 years ago
1
outlierLineages should provide node number in addition to edge index

#7 emvolz opened 5 years ago
0
Can produce negative branch lengths when estimating sample times event when temporalConstraints is TRUE

#6 emvolz opened 5 years ago
1
meanRateLimits not obeyed in output with relaxed clock model

#5 emvolz opened 5 years ago
0
only sampling year

#4 ghost closed 6 years ago
6
sts

#3 ghost closed 6 years ago
1
TODO

#2 emvolz closed 7 years ago
0
Enhancements?

#1 sdwfrost closed 7 years ago
1