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enasequence / webin-cli

Webin command line submission program.
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ERROR: Organism name "Wickerhamomyces sp." is not submittable. #116

Open SumeetTiwari07 opened 8 months ago

SumeetTiwari07 commented 8 months ago

Hi I am trying to validate the submission of contigs of Wickerhamomyces sp. with taxid 1917781. But it always gives this: ERROR: Organism name "Wickerhamomyces sp." is not submittable.

I did check if the taxon is submittable or not using rest API.

https://www.ebi.ac.uk/ena/taxonomy/rest/tax-id/1917781 { "taxId" : "1917781", "scientificName" : "Wickerhamomyces sp.", "formalName" : "false", "rank" : "species", "division" : "FUN", "lineage" : "Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Wickerhamomyces; ", "geneticCode" : "1", "mitochondrialGeneticCode" : "3", "submittable" : "true", "binomial" : "false" }

Not able to understand why this error came?

Any help will be useful.

Best wishes, Sumeet

xvazquezc commented 6 months ago

Did you figure it out? Same error with "Penicillium sp." opened a ticket with ENA 2 weeks ago - still no reply.

SumeetTiwari07 commented 6 months ago

Not yet! waiting for their response.