envest / ballad

Took kit for working with single cell mutations
MIT License
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Incorporate variant effect prediction into filtered variant summary file #7

Closed envest closed 1 month ago

envest commented 3 months ago

VEP returns more than one prediction per variant. Pick the best one (eg the one on canonical transcript) and select most important information. Full annotation may be stored separately.

Question: run within filter_loom.py or after the fact