FASTA export: 80 chars limit

epam / Indigo

Universal cheminformatics toolkit, utilities and database search tools

http://lifescience.opensource.epam.com

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FASTA export: 80 chars limit #1843

Closed even1024 closed 5 months ago

even1024 commented 6 months ago

Background FASTA specification recommends to make sequence strings shorter than 80 characters

Solution Implement 80 chars limit formatting for exported sequences.

Example:

>MCHU - Calmodulin - Human, rabbit, bovine, rat, and chicken
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID
FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD
IDGDGQVNYEEFVQMMTAK*

AlexeyGirin commented 4 months ago

Verified.

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