epam / Indigo

Universal cheminformatics toolkit, utilities and database search tools
http://lifescience.opensource.epam.com
Apache License 2.0
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Support autodetection for macromolecules file formats #1929

Open rrodionov91 opened 2 months ago

rrodionov91 commented 2 months ago

Background Currently convert api method allows to detect file format automatically if parameter input_format: chemical/x-unknown passed. However for sequence and fasta formats it is impossible to identify which type of sequence need to be converted (peptide, rna or dna).

Solution Introduce new parameter monomer_type: <RNA | DNA | PEPTIDE> and format autodetection for sequence ans fasta formats.