[S2] Upload Seq file to AWS Omics Store with JS SDK - Githubissues

epam / cloud-pipeline

Cloud agnostic genomics analysis, scientific computation and storage platform

https://cloud-pipeline.com

Apache License 2.0

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[S2] Upload Seq file to AWS Omics Store with JS SDK #3483

Open SilinPavel opened 3 months ago

SilinPavel commented 3 months ago

Should be done with a new form on AWS Seq Store view: fields:

File type (BAM, CRAM, UBAM, FASTQ)
Reference from ref storage (required for BAM and CRAM),
Name (str)
Description (str)
SampleID (str),
SubjectID (str)
GeneratedFrom (str)

Implementation through: https://docs.aws.amazon.com/AWSJavaScriptSDK/latest/AWS/Omics.html https://docs.aws.amazon.com/omics/latest/dev/synchronous-uploads.html