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epam / fonda

Fonda is a framework which offers scalable and automatic analysis of multiple NGS sequencing data types
Apache License 2.0
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scRnaExpressionCellRanger workflow - doubletdetection not invoked #158

Closed syansanofi closed 4 years ago

syansanofi commented 4 years ago

Background
Under condition of:
toolset=count+qc+doubletdetection
doublet detection is not invoked

However if tool includes scrublet:
toolset=count+qc+scrublet+doubletdetection
doublet detection is invoked along with scrublet