RNA SeQC tool: add bwa argument

epam / fonda

Fonda is a framework which offers scalable and automatic analysis of multiple NGS sequencing data types

Apache License 2.0

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RNA SeQC tool: add bwa argument #161

Closed kamyshova closed 4 years ago

kamyshova commented 4 years ago

This PR provides of possibility to pass the "-bwa" argument to RNA_SEQC tool directly. Otherwise, the RNA_SEQC tool expects the "bwa" executable is on the $PATH.