epam / ketcher

Web-based molecule sketcher
https://lifescience.opensource.epam.com/ketcher/demo.html
Apache License 2.0
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Macro: Oxygen cannot be a leaving group in a chemical reaction #3551

Closed Zhirnoff closed 10 months ago

Zhirnoff commented 11 months ago

Steps to Reproduce

  1. Switch to Macromolecules mode
  2. Add Peptide and RNA (or CHEM) monomer on canvas (ex.: Peptide - 3-sulfoalanine; RNA - Phosphate; CHEM - Azide)
  3. Bond placed monomers using Bond Tool
  4. Look at leaving group in appeared modal window

Actual behavior Oxygen(O) shows up as leaving group in chemical reaction

Expected behavior Hydroxyl group(OH) should show up as a leaving group in a chemical reaction

Screenshots

Screenshot 2023-11-15 at 9 09 53 PM

Desktop (please complete the following information):

Ketcher version Version 2.15.0-rc.4

Zhirnoff commented 9 months ago

Tested.