Open from Clipboard >> Select Sequence and Peptides
Add CCCAAATTT >> Add to canvas
Connect any first and last peptides
switch to Sequence mode - we can see link for letters
Save >> Fasta >> new connection is lost
Actual behavior
The structure is saved without any notifications to the user and side chain connections are lost.
Expected behavior
The user should be warned that certain info will be lost when saving to FASTA or sequence format.
In case modified monomers are included into sequence:
"The chosen format doesn't support modified monomers, they will be replaced by unmodified versions."
In case there are side connections (including cyclic structures):
"The chosen format doesn't support side-chain connections, These connections will be lost."
AlexeyGirin
commented
3 months ago
Steps to Reproduce
Actual behavior The structure is saved without any notifications to the user and side chain connections are lost.
Expected behavior The user should be warned that certain info will be lost when saving to FASTA or sequence format. In case modified monomers are included into sequence: "The chosen format doesn't support modified monomers, they will be replaced by unmodified versions." In case there are side connections (including cyclic structures): "The chosen format doesn't support side-chain connections, These connections will be lost."
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Version 2.20.0-rc.1 Build at 2024-03-15; 15:36:45 Indigo Toolkit Version 1.19.0-rc.1.0-g8cd9f1e27-wasm32-wasm-clang-12.0.0