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epgg / eg

EpiGenome Gateway - WashU EpiGenome Browser
http://epigenomegateway.wustl.edu/legacy/
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General questions about Docker Image #86

Open mackeyja opened 5 years ago

mackeyja commented 5 years ago

Apparently the browser does not work completely when installed on a local Red Hat Server. I would like to explore the Docker image. How much space is required for the docker image? Do I still have the option to install only certain genomes? (for instance my lab only needs mm9, mm10 and hg38). Will all of the Annotations and Public tracks work "out of the box"? Thanks in advance for your response.

lidaof commented 5 years ago

Hi @mackeyja,

As we announced on our google plus form, our effort has been focus on the development of a new browser for the current browser replacement. So sorry for little effort on the current browser. And I personally don't have any Redhat box to test...

In terms of size, 10Gb should be pretty enough. you can install your own genome, the annotation tracks you need to change the URL from http to https, that should fix it.

Hope this helps.