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epi2me-labs / pore-c-py

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filter_pairs #11

Open ilead-cong opened 1 month ago

ilead-cong commented 1 month ago

hi!

I have a question about annotate_bam. The two parameters paired_end_minimum_distance and paired_end_maximum_distance do not work. In the code below, the default parameters in the definition of the function filter_pairs are as follows: min_distance=0, max_distance=float("inf"). Is there any other place to define them?

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sarahjeeeze commented 1 month ago

Hi, this is an oversight - we will look at reinstating these filter options.