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epi2me-labs
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pychopper
cDNA read preprocessing
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FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future.
#22
NanoCoreUSA
closed
1 year ago
1
Fix issue with spaces in the read name
#21
rlowe-altoslabs
closed
1 year ago
1
Using -x option on datasets produced by PCS111
#20
tann5er
closed
1 year ago
1
change append to concat for pandas.df
#19
zhenyuan992
closed
1 year ago
1
Pandas df.append was removed from version 2.0
#18
ChristophBoerlin
closed
1 year ago
9
issues with the unclassified file
#17
VandaLovejoy
closed
1 year ago
2
Dorado and pychopper
#16
rlowe-altoslabs
closed
1 year ago
2
TypeError: <lambda>() missing 1 required positional argument: 'Umi' when using custom primers on edlib backend
#15
jkbenotmane
closed
1 year ago
4
remove list indexing in `_build_segments` for 30% speed up in building segments
#14
zhenyuan992
closed
1 year ago
3
Progress halts without error message, have left it for 10+ hours
#13
tewdwr
closed
1 year ago
6
Compatability w/ New PCR-cDNA Kit (111.24)
#12
NanoCoreUSA
closed
1 year ago
8
pychopper hanging/stalls at random points
#11
andreas-wilm
closed
1 year ago
2
Incorrect classification of reads in multiplexed samples
#10
matthew-valentine
closed
1 year ago
1
Can I use pychopper after an adaptive sampling run?
#9
smf96
closed
1 year ago
2
random hexamers for direct-cdna sequencing
#8
evihadj
closed
1 year ago
1
High number of unclassified reads (kit DCS109) even with rescue mode (-x)
#7
camillaugolini-iit
closed
1 year ago
2
ImportError: cannot import name seq_utils
#6
Catherine9826
closed
1 year ago
6
Reads which are still classified as reverse after using oychopper
#5
senidr
closed
1 year ago
1
Q: compatibility with multiplexed libraries?
#4
rebeelouise
closed
1 year ago
2
low number of usable reads with DCS109
#3
kallekarlhugo
closed
1 year ago
9
Memory Issue / Number of Reads to Autotune On
#2
BuddahKat
closed
1 year ago
2
Read misorientation
#1
skudashev
closed
1 year ago
4
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