Closed leoncaly closed 1 year ago
Hello - thanks for your bug report.
This is an issue with tabulate which is used by snakemake, which is used by pangolin. I'll hopefully have a fix soon.
Thanks
Matt
Thank you Matt. Is there a work around that I can implement at my end to get the pipeline up and running again?
This should be fixed now.
What happened?
A bug happened!
wf-artic pipeline fails at pipeline:pangolin. This is occurring across multiple machines running Ubuntu 20 LTS.
The wf-artic pipeline was successfully run the morning (07:00) of 7th October, 2022 (Australian Eastern Standard Time). When the same dataset was run at 17:00 the same day, the pipline:pangolin error occurred.
No changes to software or updates occurred during that time across all machines that A bug happened!
Operating System
ubuntu 20.04
Workflow Execution
Command line
Workflow Execution - EPI2ME Labs Versions
No response
Workflow Execution - Execution Profile
Conda
Workflow Version
v0.3.18
Relevant log output