Open VICTO160 opened 1 month ago
@VICTO160 Thanks for raising this. Its a hotly requested feature so we'll be working on adding it to the next release!
Just publishing the flye_stats.tsv would be great.. I still dont understand why is this not published, as this is the point of the whole pipeline. In the meantime one can use
find work -type f -name *_flye_stats.tsv -exec cp "{}" . \;
to get them out of the work directory.
Is your feature related to a problem?
no
Describe the solution you'd like
Can either the flye_stats.tsv file be saved in the output file, or the contigs be reported as circular/linear in the HTML file output.
Describe alternatives you've considered
Manually copying file out of intermediate subdirectories.
Additional context
No response