search

epi2me-labs / wf-bacterial-genomes

Small variant calling for haploid samples
https://labs.epi2me.io/
Other
26 stars 8 forks source link

[Bug]: program doesn't run #7

Closed matteo1313 closed 1 year ago

matteo1313 commented 1 year ago

What happened?

First off thank you for this great program <3

The program unfortunately does not run. I have attached the screenshot of my termainal to show the error message that I am getting. It says this: No such variable: Exception evaluating property 'out' for nextflow.script.ChannelOut, Reason: groovy.lang.MissingPropertyException: No such property: out for class: groovyx.gpars.dataflow.DataflowBroadcast

Thank you for the help!

Screenshot from 2023-04-27 09-01-50

Operating System

ubuntu 20.04

Workflow Execution

Command line

Workflow Execution - EPI2ME Labs Versions

No response

Workflow Execution - CLI Execution Profile

None

Workflow Version

0.2.5

Relevant log output

There is no log output in my output directory.
sarahjeeeze commented 1 year ago

Hi, Looks like your local pull and the version you are running are not in sync. Also the most recent version is v0.2.12 Perhaps try nextflow pull to ensure its up to date. 

nextflow pull epi2me-labs/wf-bacterial-genomes
nextflow run epi2me-labs/wf-bacterial-genomes ... rest of your cmd
sarahjeeeze commented 1 year ago

Closing through lack of response.