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epi2me-labs / wf-single-cell

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Can this pipeline work with other methods besides 10x? #112

Closed mpage21 closed 5 months ago

mpage21 commented 5 months ago

We are using a different single-cell method and not 10x with our ONT reads. Is there a simple way for us to modify the pipeline to work with it?

nrhorner commented 5 months ago

Hi @mpage21 Currently this workflow only supports 10x kits I'm afraid. There's no simple way to make it handle other kits.