epi2me-labs / wf-single-cell

Other
69 stars 34 forks source link

3prime v4 support #120

Open Lisa-We opened 1 month ago

Lisa-We commented 1 month ago

Is your feature related to a problem?

Current wf is not compatible with new 10X chemistry (3prime v4)

Describe the solution you'd like

Enable support for 3prime v4 chemistry

Describe alternatives you've considered

N/A

Additional context

Error message with current wf when trying to run 3prime v4: "ValueError: the following are not valid kit and version combinations: {'3prime v4'}"

cjw85 commented 1 month ago

Hi @Lisa-We,

We add kits to the workflow as and when we have internally tested them with our sequencing chemistry.