epi2me-labs / wf-transcriptomes

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pychopper options with cDNA prepared using LSK114 #13

Closed yxsee closed 11 months ago

yxsee commented 1 year ago

What happened?

My cDNA libraries were prepared using LSK114. What pychopper options (-k) should I input with this kit?

Operating System

Windows 10

Workflow Execution

EPI2ME Labs desktop application

Workflow Execution - EPI2ME Labs Versions

No response

Workflow Execution - CLI Execution Profile

None

Workflow Version

v0.1.8

Relevant log output

-
nrhorner commented 1 year ago

I don't believe Pychopper will give acceptable results on data generated with the LSK114 git. This kit will be added shortly to pychopper.

nrhorner commented 11 months ago

Hi @yxsee

LSK114 is now supported with -k LSK114. Please let us know if you encounter any issues