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epi2me-labs / wf-transcriptomes

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How to manipulate wf-transcriptomes with docker, and what is the exact command? #84

Open haozhang501 opened 2 months ago

haozhang501 commented 2 months ago

Ask away!

I've pulled the relevant docker packages, but I can't run them with docker once I'm in, what's the next step? Command: docker pull ontresearch/wf-common docker pull ontresearch/wf-transcriptomes How to use: docker run --user $(id -u):$(id -g) --group-add 100 -P -v /data/storeData/ztron/zhanghao/02.pipline/Full_length_transcriptome_pipline/epi2me _labs_wf_transcriptomes:/test ontresearch/wf-transcriptomes:latest .............

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sarahjeeeze commented 2 months ago

Hi, we don't support the use of the container independently from the workflows.

If you follow the install and run section in the read me then it should work.