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epiforecasts
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EpiNow
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
https://epiforecasts.io/EpiNow
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Strange error for some regions in regional rt pipeline
#99
BvdM0
closed
4 years ago
4
Usage of delay_def instead of incubation_def in simulation.
#98
fvalka
closed
4 years ago
2
Added function to simulate cases
#97
seabbs
closed
4 years ago
1
Upscale from actual report -> report
#96
seabbs
closed
4 years ago
0
Adjust upscale
#95
seabbs
closed
4 years ago
0
Truncated gamma in stan
#94
seabbs
closed
4 years ago
0
Review
#93
seabbs
closed
4 years ago
0
Broken link to www.epiforecasts.io
#92
edbaskerville
closed
4 years ago
1
Memory leak
#91
seabbs
closed
4 years ago
3
Installation fails because "countrycode" is in Suggests, but should be in Imports
#90
manulari
closed
4 years ago
1
Merging master changes to test stan replacement
#89
seabbs
closed
4 years ago
0
Broken Code Issues
#88
tanaytrivedi
closed
4 years ago
3
Refactor delay
#87
seabbs
closed
4 years ago
2
Time varying window
#86
seabbs
closed
4 years ago
0
Merging master changes into branch
#85
seabbs
closed
4 years ago
0
Support varying mods by status
#84
seabbs
closed
4 years ago
0
Bug in dist_fit?
#83
manulari
closed
4 years ago
1
Troubleshooting in usage of regional_rt_pipeline
#82
praveentiru
closed
4 years ago
1
Batch delay
#81
seabbs
closed
4 years ago
1
update caption for forecasts
#80
kathsherratt
closed
4 years ago
0
Rt estimates in declining epidemics
#79
seabbs
closed
4 years ago
1
Reporting delay certainty
#78
seabbs
closed
4 years ago
0
Reduce ram
#77
seabbs
closed
4 years ago
3
make restrition go in the correct direction
#76
seabbs
closed
4 years ago
0
Compatibility with RECON packages
#75
thibautjombart
closed
4 years ago
3
Using Poisson glm to estimate growth rate
#74
ffinger
closed
4 years ago
3
reorder variable rename
#73
seabbs
closed
4 years ago
0
date
#72
seabbs
closed
4 years ago
0
data -> date
#71
seabbs
closed
4 years ago
0
More optim
#70
seabbs
closed
4 years ago
0
Optims
#69
seabbs
closed
4 years ago
0
Forecast tweaks
#68
seabbs
closed
4 years ago
0
make large plots spacing adaptive depending on regions
#67
seabbs
closed
4 years ago
0
fix plot size to make possible to save
#66
seabbs
closed
4 years ago
0
Plot fix
#65
seabbs
closed
4 years ago
0
plotting made safer
#64
seabbs
closed
4 years ago
0
make summary plotting safe
#63
seabbs
closed
4 years ago
0
Report forecasts
#62
seabbs
closed
4 years ago
0
New colour palette again:
#61
jhellewell14
closed
4 years ago
0
workflow from case to EpiSoon::example_obs_rts
#60
philipus
closed
4 years ago
1
geoms in the summary plot use color not fill
#59
jhellewell14
closed
4 years ago
0
Color change
#58
jhellewell14
closed
4 years ago
0
Change to colourblind friendly colour palette
#57
jhellewell14
closed
4 years ago
1
changed to just get the CRPS score
#56
seabbs
closed
4 years ago
0
Handling of negative doubling times.
#55
seabbs
closed
4 years ago
2
Does not account for heterogeneity
#54
johnurbanik
closed
4 years ago
5
Enable onset mods
#53
seabbs
closed
4 years ago
0
Add citation info using zenodo DOI
#52
seabbs
closed
4 years ago
0
Add Zenodo
#51
seabbs
closed
4 years ago
0
Sample available delays
#50
seabbs
closed
4 years ago
0
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