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epiforecasts
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bpmodels
[No longer being developed. Use the epichains package instead]. Methods for simulating and analysing the sizes and lengths of chains from branching process models
https://epiforecasts.io/bpmodels/
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Link in README goes to old Epiverse-TRACE site and produces 404 error
#152
joshwlambert
opened
2 months ago
0
Replace `epiversetheme` with darkly
#151
jamesmbaazam
closed
2 months ago
0
Ensure non-zero negative binomial offspring parameters
#150
jamesmbaazam
closed
2 months ago
1
`chain_sim()` fails with a negative binomial and `mu = 0` and `size = 0`
#149
joshwlambert
closed
2 months ago
2
Change package URLs to epiforecasts.io
#148
jamesmbaazam
closed
4 months ago
0
Change pkgdown url to epiforecasts
#147
jamesmbaazam
closed
4 months ago
0
Add retrement note to all vignettes
#146
jamesmbaazam
closed
4 months ago
0
Retire {bpmodels} and signpost to {epichains}
#145
jamesmbaazam
closed
4 months ago
0
Transfer {bpmodels} to epiforecasts group after {epichains} release
#144
jamesmbaazam
closed
2 months ago
1
Tests for statistical correctness in random samplers
#143
jamesmbaazam
opened
1 year ago
0
Remove CRAN install instruction
#142
jamesmbaazam
closed
1 year ago
1
Add package reviewers
#141
jamesmbaazam
closed
1 year ago
0
Add package reviewers
#140
jamesmbaazam
closed
1 year ago
0
Clarify documentation of `offspring_ll()`
#139
jamesmbaazam
opened
1 year ago
0
Combine theory and literature vignettes under one category on website
#138
jamesmbaazam
closed
1 year ago
0
Move theory vignette to Literature navbar on website
#137
jamesmbaazam
closed
1 year ago
5
increase sensitivity of tests
#136
sbfnk
closed
1 year ago
0
typo and consistency tweaks
#135
TimTaylor
closed
1 year ago
0
add vignette with theoretical background
#134
sbfnk
closed
1 year ago
0
review projection vignette
#133
sbfnk
closed
1 year ago
2
Run styler
#132
sbfnk
opened
1 year ago
1
Add input checking and improve test coverage
#131
jamesmbaazam
closed
1 year ago
6
Fix figure in modelling vignette
#130
jamesmbaazam
closed
1 year ago
0
Add spellchecking
#129
jamesmbaazam
closed
1 year ago
1
Fix the representation of package, function and argument names
#127
jamesmbaazam
closed
1 year ago
0
Revise Get Started vignette
#126
jamesmbaazam
closed
1 year ago
0
Add a GHA workflow for cff file syncing
#125
jamesmbaazam
closed
1 year ago
2
Revise package title and README
#124
jamesmbaazam
closed
1 year ago
0
Add GHA for syncing the `CITATION.cff` file with the DESCRIPTION and CITATION file
#123
jamesmbaazam
closed
1 year ago
0
Move the package maintainer to first position on the author list
#122
jamesmbaazam
closed
1 year ago
1
Remove the `find_function_name()` function
#121
jamesmbaazam
closed
1 year ago
1
Update the .lintr configuration to match with that in packagetemplate
#120
jamesmbaazam
closed
1 year ago
0
Remove gitattributes file
#119
jamesmbaazam
closed
1 year ago
1
Align workflows with packagetemplate
#118
jamesmbaazam
closed
1 year ago
1
Justify why `chain_threshold` is set to `1000` in covid-19 modelling vignette
#117
jamesmbaazam
closed
1 year ago
1
Improve wording of `pop` argument in `chain_sim_susc()`
#116
jamesmbaazam
opened
1 year ago
0
Remove `find_function_name()` from codebase
#115
jamesmbaazam
closed
1 year ago
0
Use the @noRd tag to prevent generating documentation files of internal functions
#114
jamesmbaazam
opened
1 year ago
0
Add input checking to the borel functions
#113
jamesmbaazam
closed
1 year ago
0
Provide a default value for `obs_sim` in `chain_ll()`
#112
jamesmbaazam
closed
1 year ago
1
Crosscheck correctness of figure 1 in covid-19 modelling vignette
#111
jamesmbaazam
closed
1 year ago
0
Revise vignette: refer to functions in inline text by suffixing with `()`
#110
jamesmbaazam
closed
1 year ago
0
Push ?chain_ll to inline in "Get Started" vignette
#109
jamesmbaazam
closed
1 year ago
0
Reword part about offspring distribution in Get Started vignette
#108
jamesmbaazam
closed
1 year ago
0
Explain why we set seed
#107
jamesmbaazam
closed
1 year ago
0
Fix reproduction number not rendering correctly in "Get Started" vignette
#106
jamesmbaazam
closed
1 year ago
0
Update README to use explicit argument matching
#105
jamesmbaazam
closed
1 year ago
0
Collapse multiple `knitr::opts_chunk$set()` calls into single call
#104
jamesmbaazam
opened
1 year ago
0
Use consistent NEWS sections
#103
jamesmbaazam
closed
1 year ago
1
Add spell checking to package
#102
jamesmbaazam
closed
1 year ago
0
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