If there's no new data to process the summary data errors
2021-01-31 21:01:47 INFO Data has not been updated since last run. If wanting to run again then remove /home/rstudio/covid-rt-estimates/last-update/colombia.rds
2021-01-31 21:01:47 DEBUG Max date in data - 2021-01-30, last run date from file - 2021-01-30
2021-01-31 21:01:47 DEBUG add stats to output
2021-01-31 21:01:47 WARN simpleWarning in system(paste0("for f in ", location$target_folder, "/*/latest/summary.rds; do git log -n 1 --pretty=format:\"%ad\" --date=iso -- \"$f\" 2>/dev/null; done"), : running command 'for f in subnational/colombia/cases/national/*/latest/summary.rds; do git log -n 1 --pretty=format:"%ad" --date=iso -- "$f" 2>/dev/null; done' had status 128
2021-01-31 21:01:47 WARN simpleWarning in gsub("~m", msg, message, fixed = TRUE): argument 'replacement' has length > 1 and only the first element will be used
2021-01-31 21:01:47 WARN simpleWarning in gsub("~m", msg, message, fixed = TRUE): argument 'replacement' has length > 1 and only the first element will be used
2021-01-31 21:01:47 WARN colombia: simpleWarning in system(paste0("for f in ", location$target_folder, "/*/latest/summary.rds; do git log -n 1 --pretty=format:\"%ad\" --date=iso -- \"$f\" 2>/dev/null; done"), : running command 'for f in subnational/colombia/cases/national/*/latest/summary.rds; do git log -n 1 --pretty=format:"%ad" --date=iso -- "$f" 2>/dev/null; done' had status 128
2021-01-31 21:01:47 DEBUG git not working - try stat
stat: cannot stat 'subnational/colombia/cases/national/*/latest/summary.rds': No such file or directory
2021-01-31 21:01:47 WARN simpleWarning in system(paste0("for f in ", location$target_folder, "/*/latest/summary.rds; do stat -c %y $f; done"), : running command 'for f in subnational/colombia/cases/national/*/latest/summary.rds; do stat -c %y $f; done' had status 1
2021-01-31 21:01:47 WARN simpleWarning in gsub("~m", msg, message, fixed = TRUE): argument 'replacement' has length > 1 and only the first element will be used
2021-01-31 21:01:47 WARN simpleWarning in gsub("~m", msg, message, fixed = TRUE): argument 'replacement' has length > 1 and only the first element will be used
2021-01-31 21:01:48 WARN colombia: simpleWarning in system(paste0("for f in ", location$target_folder, "/*/latest/summary.rds; do stat -c %y $f; done"), : running command 'for f in subnational/colombia/cases/national/*/latest/summary.rds; do stat -c %y $f; done' had status 1
If there's no change there'll be no timing data. Also don't publish.
If there's no new data to process the summary data errors
If there's no change there'll be no timing data. Also don't publish.