Contains models and tools to produce short-term forecasts for both case and sequence notifications assuming circulation of either one or two variants. Tools are also provided to allow the evaluation of the use of sequence data for short-term forecasts in both real-world settings and in user generated scenarios.
Plotting functions can be difficult to test thoroughly. Suggest using vidffr and a snapshot of saved results from summarise_posterior(). To prevent the snapshot from getting out of date as summarise_posterior is changed may need to use git hooks to force an update.
Plotting functions can be difficult to test thoroughly. Suggest using
vidffrand a snapshot of saved results fromsummarise_posterior(). To prevent the snapshot from getting out of date assummarise_posterioris changed may need to use git hooks to force an update.vidffir: https://github.com/r-lib/vdiffr