epigen-UCSD / epigen_ucsd_django

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add snATAC (combinatory barcode method) #169

Open biomystery opened 5 years ago

biomystery commented 5 years ago

nextseq app (to demultiplex)

[x] disable one-by-one entry
[x] radio input for PE/SE and Experiments type:
[x] runinfo model <- bulk or snATAC or 10xATAC or 10xRNA
[x] version of barcodes info ()?
[x] i7 and i5 (index 1 and index2) equivelent
[x] call bcl2fastq first
[x] then call ATACdemupltiplex
[ ] put the additional barcode usage info into the library summary page

biomystery commented 5 years ago

170