switch all visualizations from panels to single plots - Githubissues

epigen / MrBiomics

MrBiomics - Modules & Recipes augment Bioinformatics for Multi-Omics Analyses at Scale

MIT License

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switch all visualizations from panels to single plots #2

Closed sreichl closed 4 months ago

sreichl commented 9 months ago

Switch from panels to individual plots in directory, so that the rule output is a directory.

[x] Check how the report behaves if output is a directory. How to make it still readable and nice?
- yes! here
[x] Make a checklist for all modules -> and individual issues?
[x] Unsupervised Analysis
[x] Processing & Integration
[x] Differential Analysis with limma
[x] Enrichment Analysis
[x] Genome Track Visualization
[x] ATAC-seq Processing
[x] scRNA-seq Processing using Seurat
[x] Differential Analysis using Seurat
[x] Perturbation Analysis using Mixscape from Seurat