issues
search
epigen
/
atacseq_pipeline
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
https://epigen.github.io/atacseq_pipeline/
MIT License
44
stars
2
forks
source link
reduce scope/remove redundancy to other modules
#24
Closed
sreichl
closed
11 months ago
sreichl
commented
12 months ago
[x] remove cemm slurm profile from repo
[x] Remove all redundant downstream analyses
[x] unsupervised analysis
[x] split
[x] region filter
[x] HRV selection
[x] normalization
[x] var mean plots
[x] Remove singularity and dockerfile
[x] adapt and reduce documentation ie no redundancy to MR.PARETO docs
[x] refer to spilterlize and other modules for downstream analysis
[x] Adapt workflow catalog yaml (remove Singularity)