epigen / rnaseq_pipeline

RNA-seq Data Processing, Quantification and Annotation Workflow.
MIT License
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v1.0.0 #1

Open sreichl opened 1 month ago

sreichl commented 1 month ago

additional considerations

sreichl commented 1 month ago

Resources download structure as result/ dir? ie Resources/project/module/.

Think about it and check in other workflows. If not automated download then make the recommendation of this structure.

Put into MRP module specifications

sreichl commented 1 month ago
sreichl commented 1 month ago

What if it were easy and I could trim in the same step as align?

sreichl commented 1 month ago

Tools to check

sreichl commented 1 month ago

trimmomatic