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scrnaseq_processing_seurat
A Snakemake workflow and MrBiomics module for processing and visualizing (multimodal) sc/snRNA-seq data generated with 10X Genomics Kits or in the MTX matrix file format powered by the R package Seurat.
https://epigen.github.io/scrnaseq_processing_seurat/
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full tests on new functions
#20
Closed
sreichl
closed
9 months ago
sreichl
commented
9 months ago
[x] AKsmall_test
[x] Lee2021NatGenet -> #17
[x] EMICROP (when does it break? -> e.g., Heatmaps) -> RUNNING