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epigeneticstoocean / paper-gonad-meth

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Add code for identifying transposable elements #3

Closed sr320 closed 5 years ago

sr320 commented 5 years ago

@ https://github.com/epigeneticstoocean/paper-gonad-meth/tree/master/code

kubu4 commented 5 years ago

I have this in a Jupyter notebook. Do you want me to pare it down to a more re-usable bash script?

sr320 commented 5 years ago

yes please - something that is quasi implementable by reviewer.

kubu4 commented 5 years ago

https://github.com/epigeneticstoocean/paper-gonad-meth/blob/master/code/te_repeatmasker.sh