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To-do list for epirecipes
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Models of Ebola #23

Closed epichef closed 5 years ago

ViralVerity commented 5 years ago

Working on Khan 2015 (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4347917/) in python, but for now starting with a mass action transmission term!

sdwfrost commented 5 years ago

Hi @ViralVerity , are you going to fit the model to with NLS? Also see this paper (in POMP, so not Python-specific):

http://rspb.royalsocietypublishing.org/content/282/1806/20150347.short

ViralVerity commented 5 years ago

I will plug in the values that they got for now, but if I look at fitting later on, I will post it here

sdwfrost commented 5 years ago

Cumulative cases that @emvolz and I used for our paper here if the mood takes you.

https://github.com/sdwfrost/ebov-methods-comparison/blob/master/ebov_cs.txt

sdwfrost commented 5 years ago

Added models by @ViralVerity and @twomagpi

https://github.com/epirecipes/epicookbook/commit/73d8cc6e50d8b3d0bca90514b699a35266db4139