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epirecipes / sir-julia

Various implementations of the classical SIR model in Julia
MIT License
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SIR type model with a spatial dimension from incomplete observations #19

Open mschauer opened 4 years ago

mschauer commented 4 years ago

In https://arxiv.org/abs/2010.03509, sections 7.3 and 11, we have a bit of a different approach to solve a SIR type model with a spatial dimension from incomplete observations. We consider a population of n individuals and assume that each individual gets infected with rate proportional to the number infected neighbours. Code is in https://github.com/fmeulen/GuidedDAGExamples.jl Best!

sdwfrost commented 4 years ago

Thanks @mschauer! Would you like to contribute your approach to this repository along the same style of the existing examples? If not, I can add, but it may take me some time to get to this.

mschauer commented 4 years ago

Hehe, yes, "may take some time" will be true regardless whether I or you look into this. But ping me if you want to have a look, I am happy to discuss what we are doing there. Btw, there is also this one: http://www.math.chalmers.se/~smoritz/journal/2018/01/19/parameter-inference-for-a-simple-sir-model/