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epirecipes / sir-julia

Various implementations of the classical SIR model in Julia
MIT License
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Add Kermack-McKendrick model/age of infection #47

Open sdwfrost opened 2 years ago

sdwfrost commented 2 years ago

See https://en.wikipedia.org/wiki/Kermack%E2%80%93McKendrick_theory

Some work on this using NeuralPDE.jl can be found here although it's very slow.

MethodOfLines.jl doesn't (yet) support integrals.

Fowler and Hollingsworth generate some simulations, and I have some Fortran code that I could port.

sdwfrost commented 2 years ago

See also https://www.medrxiv.org/content/10.1101/2021.03.26.21254385v1.full

sdwfrost commented 1 year ago

There is also https://arxiv.org/abs/2010.10955 which gives a straightforward discretization scheme, though the structure of the model isn't exactly KM.