A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.
This issue was flagged by @BlackEdder: The way that contact matrix scaling due to contact interventions works currently only reduces the incoming contacts, and not the outgoing contacts. This is similar to reducing the susceptibility of age groups, but not their effect in transmitting infections to other individuals.
This should be fixed across models by having the rows and the columns of the contact matrix multiplied by the contact reduction vector resulting from intervention_on_cm() in both the R and C++ code.
This issue was flagged by @BlackEdder: The way that contact matrix scaling due to contact interventions works currently only reduces the incoming contacts, and not the outgoing contacts. This is similar to reducing the susceptibility of age groups, but not their effect in transmitting infections to other individuals.
This should be fixed across models by having the rows and the columns of the contact matrix multiplied by the contact reduction vector resulting from
intervention_on_cm()in both the R and C++ code.