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epiverse-trace
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finalsize
R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility
https://epiverse-trace.github.io/finalsize/
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rename r_eff() function title
#167
avallecam
closed
1 year ago
0
Add Roz as contributor
#166
rozeggo
closed
1 year ago
0
Add Andree details as contributor
#165
pratikunterwegs
closed
1 year ago
2
Reviewer role added to DESCRIPTION
#164
joshwlambert
closed
1 year ago
0
Release finalsize 0.2.0
#163
pratikunterwegs
closed
1 year ago
2
Test statistical correctness for no-between group contacts
#162
pratikunterwegs
opened
1 year ago
0
Full package review for v0.2.0 release
#161
pratikunterwegs
closed
1 year ago
6
Add contributor details
#160
pratikunterwegs
closed
1 year ago
3
Miscellaneous fixes and additions
#159
pratikunterwegs
closed
1 year ago
0
Add a lifecycle badge
#158
pratikunterwegs
closed
1 year ago
1
Replace “Epiverse Initiative” by “Epiverse-TRACE” in README
#157
avallecam
closed
1 year ago
0
Using CSL-JSON for citations
#156
pratikunterwegs
closed
1 year ago
0
Use CSL-JSON for citations
#155
pratikunterwegs
closed
1 year ago
0
Ignore vignettes for repo langs stats
#154
pratikunterwegs
closed
1 year ago
0
Vignette comparing finalsize with SIR model
#153
pratikunterwegs
closed
1 year ago
0
R_eff and R_0 <-> lambda conversions
#152
pratikunterwegs
closed
1 year ago
0
Add function for R_eff
#151
pratikunterwegs
closed
1 year ago
0
Allow C++ code sharing
#150
pratikunterwegs
closed
1 year ago
1
Delete lint-changed-files.yaml
#149
Bisaloo
closed
1 year ago
0
Render dev version of website
#148
pratikunterwegs
closed
1 year ago
0
Render dev and release documentation
#147
pratikunterwegs
closed
1 year ago
0
Allow finalsize C++ code sharing
#146
pratikunterwegs
closed
1 year ago
0
Replace links in contributing page
#145
avallecam
closed
1 year ago
1
Add vignette with five case examples of susceptibility matrices
#144
avallecam
closed
1 year ago
6
Simplify "Get started" vignette
#143
pratikunterwegs
closed
1 year ago
2
Single demography group with uniform mixing
#142
pratikunterwegs
closed
1 year ago
0
Correct vignette, fixes #140
#141
pratikunterwegs
closed
1 year ago
0
Compact output dataframe in vignette
#140
pratikunterwegs
closed
1 year ago
0
Replace `n_demo_grps` object name across vignettes
#139
avallecam
closed
1 year ago
1
Add tab to run final_size() over samples using {purrr}
#138
avallecam
closed
1 year ago
1
Add links to vignettes in "New to finalsize?" box
#137
avallecam
closed
1 year ago
0
Replace “Basic usage” by “Get started”
#136
avallecam
closed
1 year ago
0
Change to ggplot facet_grid() to compare two susceptibility variations
#135
avallecam
closed
1 year ago
0
Remove configuration lines of ggplot2 visualizations
#134
avallecam
closed
1 year ago
2
Move the section “order demographic groups” to the Viz code section
#133
avallecam
closed
1 year ago
0
Correct examples, vignettes, tests to use real eigenvalues
#132
pratikunterwegs
closed
1 year ago
0
Imaginary numbers when obtaining eigenvalues and eigen-vectors
#131
erees
closed
1 year ago
2
Add reference links to sources of heterogeneous susceptibility
#130
avallecam
closed
1 year ago
4
Replace the text line in code chunk about immunisation rate
#129
avallecam
closed
1 year ago
1
Add a vignette with examples for the two susceptibility-related matrices
#128
avallecam
closed
1 year ago
3
Add input and output object names in code to show how they looks like
#127
avallecam
closed
1 year ago
1
Add brief explaination about the matrix operations
#126
avallecam
opened
1 year ago
5
Replace the age groups notation only in text, but not in code
#125
avallecam
closed
1 year ago
0
Replace the POLYMOD reference link
#124
avallecam
closed
1 year ago
0
Change how to load external packages in vignettes
#123
avallecam
closed
1 year ago
4
Remove the installation step in Get started vignette
#122
avallecam
closed
1 year ago
0
Improve documentation and argument order
#121
pratikunterwegs
closed
1 year ago
6
Add vignette or tab section for videos or external use cases
#120
avallecam
opened
1 year ago
1
Replace argument names of “susceptibility” and “p_susceptibility”
#119
avallecam
closed
1 year ago
4
Change order of arguments in the final_size() function
#118
avallecam
closed
1 year ago
1
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