Teaching pipelines for outbreak analytics

[Degoot-AM]

Designing a clear and concise roadmap for teaching outbreak analytics is essential to ensure that learners can effectively understand and apply key epidemiological concepts like transmissibility and severity, similar to our roadmap for analysis, which was useful for development. Of course, the data processing part come first, see the below figure.

We purpose the following pipeline for severity.

We welcome your feedback for this and suggestions for designing pipeline for transmissibility. The roadmap helps us to design practical examples and hands-on tutorials for each step in the pipelines, starting from basic concepts and gradually introduce more complex analyses and models.

[avallecam]

I just drafted this arrangement that connects tasks/episodes.

• entry points are specified with arrows.
• an overlapped sticky note means that it is the next task in the workflow

[avallecam]

drafting a version with intermediate outputs between tasks, which are a key feature of the current roadmap