search

epruesse / SINA

SINA - Reference based multiple sequence alignment
https://sina.readthedocs.io
GNU General Public License v3.0
41 stars 4 forks source link

Allow adding sequence search result to output fasta #19

Closed a1an77 closed 5 years ago

a1an77 commented 6 years ago

Hi, I would like to have an option to include the (aligned) homology search results into the output file. Ideally with an option to limit the number of sequences included. Would that be feasible?

epruesse commented 6 years ago

Hi Alan,

most definitely yes.

It was actually possible at some point, but I seem to have dropped it. Probably because the code wasn't easy to maintain with all combinations of fasta and arb source and destination files.