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epruesse / SINA

SINA - Reference based multiple sequence alignment
https://sina.readthedocs.io
GNU General Public License v3.0
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Complete internal kmer search; add nice progress monitor #56

Closed epruesse closed 5 years ago

epruesse commented 5 years ago

fixes #57

codecov[bot] commented 5 years ago

Codecov Report

Merging #56 into master will increase coverage by 0.32%. The diff coverage is 71.21%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #56      +/-   ##
==========================================
+ Coverage   69.08%   69.41%   +0.32%     
==========================================
  Files          42       44       +2     
  Lines        4331     4335       +4     
==========================================
+ Hits         2992     3009      +17     
+ Misses       1339     1326      -13
Flag Coverage Δ
#integration 59.77% <60.98%> (+2.88%) :arrow_up:
#unittest 33.81% <29.02%> (-1.07%) :arrow_down:
Impacted Files Coverage Δ
src/famfinder.h 100% <ø> (ø) :arrow_up:
src/kmer_search.h 100% <ø> (ø) :arrow_up:
src/pseq.h 0% <ø> (ø) :arrow_up:
src/rw_arb.h 100% <ø> (ø) :arrow_up:
src/rw_fasta.h 100% <ø> (ø) :arrow_up:
src/query_arb.h 0% <ø> (ø) :arrow_up:
src/query_pt.h 0% <ø> (ø) :arrow_up:
src/cseq_impl.h 71.42% <ø> (ø) :arrow_up:
src/pseq.cpp 0% <0%> (ø) :arrow_up:
src/mesh.h 79.34% <100%> (+7.73%) :arrow_up:
... and 41 more

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