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epurdom / clusterExperiment

R package of techniques for comparing clusterings of single-cell sequencing data
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Support BiocParallel? #167

Open seandavi opened 8 years ago

seandavi commented 8 years ago

Does BiocParallel allow you any more flexibility, particularly for larger datasets or parameter spaces.

drisso commented 8 years ago

I forgot to mention it, but currently we're using mclapply in clusterMany()

I agree that switching to BiocParallel would be a good idea.

Off-topic, but scone does use BiocParallel :)

seandavi commented 8 years ago

I had noticed the mclapply call after I went looking for a parallel implementation of RSEC.

On Jun 25, 2016, at 4:04 PM, Davide Risso notifications@github.com wrote:

I forgot to mention it, but currently we're using mclapply in clusterMany()

I agree that switching to BiocParallel would be a good idea.

Off-topic, but scone does use BiocParallel :)

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